| Abbreviations | Meaning |
 | EQTV | Equine Torovirus |
| ERAV | Equine Rhinitis A Virus |
| ERBV | Equine Rhinitis B Virus |
| ERC | Enteric Cytopathic Human Orphan-rhino-coryza [virus] |
| ERHV | Erinaceid Herpesvirus |
| ERLV | Erysimum Latent Virus |
| ERV | Embu Virus |
| ERV | Entero-like Virus |
| ERV | Equine Rhinopneumonitis Virus |
| ERV | Estero Real Virus |
| ERV | Etched Ringspot Virus |
| ERVEV | Erve Virus |
| ESCPS | Euxoa Scandens Cypovirus |
| ESHV | Esocid Herpesvirus |
| ESLV | Elderberry Symptomless Virus |
| ESMOV | Eggplant Severe Mottle Virus |
| ESSV | Essaouira Virus |
| ETIV | Eriborus Terebrans Ichnovirus |
| EUBV | Eubenangee Virus |
| EUCROMIC | European Collaborative Research On Mosaicism In Chorionic Virus Sample |
| EV | Ebola Virus |
| EV | Encephalitis Or Encephalomyelitis Virus |
| EV | Enteritis Virus |
| EV | Enterovirus |
| EV | Entomopoxvirus |
| EV-69, 70, 71 | Human Enterovirus 69, 70, And 71 |
| EVIL | Exposure To Selected Viruses In Research Laboratories |
| EVV | Everglades Virus |
| EWSMV | European Wheat Striate Mosaic Virus |
| EYAV | Eyach Virus |
| EYAV-FR578 | Eyach Virus-France 578 |
| EYAV-GER | Eyach Virus-Germany |
| EYMV | Eggplant Yellow Mosaic Virus |
| F-MULV | Friend Murine Leukemia Virus |
| FADV | Fowl Adenovirus |
| FAHV | Falconid Herpesvirus |
| FARV | Farallon Virus |
| FASTV | Feline Astrovirus |
| FAV | Facio-auriculovertebral [sequence]; Feline Ataxia Virus; Floppy Aortic Valve; Fowl Adenovirus |
| FBJMSV | Finkel-Biskis-Jinkins Murine Sarcoma Virus |
| FCOV | Feline Coronavirus |
| FCV | Feline Calicivirus; Fowl Calicivirus |
| FD-MIV | Friend Derived Murine Immunosuppressive Virus |
| FDLV | Fer De Lance Virus |
| FDV | Fiji Disease Virus; Foliar Decay Virus; Friend Disease Virus |
| FECV | Feline Enteric Coronavirus |
| FEHV | Felid Herpesvirus |
| FELV | Feline Leukemia Virus |
| FESV | Feline Sarcoma Virus |
| FFV | Feline Foamy Virus; Fruit Fly Virus |
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